It will take years to fully evaluate the Johan Santana-Phil Hughes debate

What a perfect juxtaposition last night, with Johan Santana and Phil Hughes pitching about 10 miles apart from one another.
Santana pitched adequately in picking up a no-decision against the Pirates, in a game the Mets won, 5-4, in 11 innings. I attended this game, and Santana worked hard, throwing 114 pitches over a season-low 5 2/3 innings. He mentioned the cold weather as a deterrent. He also mentioned that the Mets' scouting report indicated that Nate McLouth, who homered in the first, was supposed to take a few pitches, and that he got a few bad calls on the at-bat that produced Jason Bay's fifth-inning homer.
Over in the Bronx, meanwhile, Phil Hughes pitched horribly in losing to the Tigers, and from reading colleague Anthony Rieber's story, it sounds like Hughes' next start could be for Triple-A Scranton/Wilkes-Barres.
Does this mean that Yankees GM Brian Cashman goofed, when he passed up the opportunity to deal Hughes for Santana? In my humble opinion, it is way too early to make such a judgment.
It's hardly a shocker that Santana is posting a vastly superior 2008 to Hughes. Cashman's commitment to Hughes, Ian Kennedy and the rest of the organization's youngsters is about anything but 2008. It's about the hope of building the proverbial "player development machine," so that they don't have to overspend on the free-agent market to fill needs. The possibility that Hughes and Kennedy would need minor-league time was part of that commitment. If the Yankees don't make the playoffs in 2008, so be it. Cashman will sleep well, even if the decision costs him his job.
As stated here back when the Mets made the Santana trade, Omar Minaya performed an excellent job in waiting for the Twins to settle for what still looks like an uninspiring package of players. Have you seen Carlos Gomez's numbers? Yeesh. As you can see here, Kevin Mulvey is pitching decently for Triple-A Rochester, while Phil Humber is not. Deolis Guerra is pitching all right at Class A Fort Myers.
But you can bet that Minaya, who is set to ignore baseball's slotting system for the amateur draft after adhering to it the last couple of years, wants to build his organization to a point where it doesn't have to invest nine figures in a pitcher from another team in order to pick up an ace.
I think that the Santana trade will allow the Mets to close Shea Stadium with their first World Series title since 1986. Yet that high will last for only so long. In 2005, Red Sox fans, fresh off the first title in almost all of their lifetimes, resorting to booing 2004 heroes like Keith Foulke and Kevin Millar. Now the Red Sox, thanks to a strong farm system, are set to make a strong run every year, thanks to their commitment to player development, which includes patience. Last year, Dustin Pedroia hit .182 in April. The Sox stuck with him, and he proceeded to win the AL Rookie of the Year award.
If Hughes ultimately bombs, then sure, you can fault Cashman for not dealing him. But we need much more time here. If Hughes re-discovers himself in the minors, comes back and pitches like the guy who beat the Indians last October, then all will be well. And let's make sure that Santana justifies the Mets' long-term investment in him, beyond just this year and even next year and 2010.
Yankees fans, if you buy into the notion that it's all right to miss the playoffs once in a great while, like the defending champion Red Sox did in 2006, then you'll make it through this season.
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